RIBFIND2
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Protein

Download
  • Rigid body file
  • ChimeraX script
Cluster stats
  • Num. rigid bodies
  • Num. clustered SSEs
  • Weight
Parameters
  • Helix ratio 0.4
  • Cutoff distance 6.5
  • Min. strand length 3
  • Min. cluster size 2

Resources

  • model.pdb
  • model.dssp

Job status -

ToolTimeStatus
DSSP 0.19869112968444824 Complete
RNAVIEW 0.07415366172790527 Complete
RIBFIND 2.2677104473114014 Complete
If you use RIBFIND 2, please cite:

Malhotra S, Mulvaney T, Cragnolini T, et al.RIBFIND2: Identifying rigid bodies in protein and nucleic acid structures Nucleic Acids Research. Published online September 6, 2023. 10.1093/nar/gkad721

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