Protein

Download Cluster stats
  • Num. rigid bodies
  • Num. clustered SSEs
  • Weight
Parameters
  • Helix ratio 0.4
  • Cutoff distance 6.5
  • Min. strand length 3
  • Min. cluster size 2

RNA

Download Cluster stats
  • Num. rigid bodies
  • Num. clustered SSEs
  • Weight
Parameters
  • Cutoff distance 7.5
  • Min. strand length 3
  • Min. cluster size 2

Resources

If you use RIBFIND 2, please cite:

Malhotra S, Mulvaney T, Cragnolini T, et al.RIBFIND2: Identifying rigid bodies in protein and nucleic acid structures Nucleic Acids Research. Published online September 6, 2023. 10.1093/nar/gkad721